#Single-cell-rna-seq
Showing 16 of 16 repositories tagged #single-cell-rna-seq, ranked by stars
Deep probabilistic analysis of single-cell and spatial omics data
🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
CellRank: dynamics from multi-view single-cell data
DANCE: a deep learning library and benchmark platform for single-cell analysis
scplotter is an R package that is built upon plotthis. It provides a set of functions to visualize single-cell sequencing and spatial data in an easy and efficient way.
R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.
Generate high quality, publication ready visualizations for single cell transcriptomics data.
Color blindness friendly visualization of single-cell and bulk RNA-sequencing data
Cluster single cells and analyze cell clade relationships with colorful visualizations.
A Package for Cas9-Enabled Single Cell Lineage Tracing Tree Reconstruction
A BLAST-like toolkit for large-scale scRNA-seq data querying and annotation.
Deep Learning based cell composition analysis with Scaden.
User-friendly tool to infer cell-cell interactions and communication from gene expression of interacting proteins
A Library for Denoising Single-Cell Data with Random Matrix Theory
Computational Suite for Bioinformaticians and Biologists (CSBB) is a RShiny application developed with an intention to empower researchers from wet and dry lab to perform downstream Bioinformatics analysis
scBoolSeq: scRNA-Seq data binarisation and synthetic generation from Boolean dynamics