#Dna-sequences

lucidrains

enformer-pytorch

Implementation of Enformer, Deepmind's attention network for predicting gene expression, in Pytorch

helicalAI

helical

A framework for state-of-the-art pre-trained bio foundation models on genomics and transcriptomics modalities.

nickpoison

astsa

R package to accompany Time Series Analysis and Its Applications: With R Examples -and- Time Series: A Data Analysis Approach Using R

MAGICS-LAB

GenoArmory

GenoArmory: A Unified Evaluation Framework for Adversarial Attacks on Genomic Foundation Models