#Pdb
Showing 17 of 17 repositories tagged #pdb, ranked by stars
Full-screen console debugger for Python
A simple tutorial about effectively using pdb
Neovim thin wrapper for GDB, LLDB, PDB/PDB++ and BashDB
An open library for the analysis of molecular dynamics trajectories
Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Schake, Bolz, et al. (2025), https://doi.org/10.1093/nar/gkaf361
Tool that allows comparing symbol, type and syscall information of Microsoft Windows binaries across different versions of the OS, using a Web UI and/or LLMs.
Cross-platform tool that allows browsing and extracting C and C++ type declarations from PDB files.
A fully-featured remote and preemptive debugger for python
Terminal protein structure viewer — interactive 3D visualization of PDB/mmCIF structures with cartoon ribbons, braille rendering, and Sixel/Kitty graphics
VSCode Extension for interactively visualising protein structure data in the editor
NoPdb: Non-interactive Python Debugger
Some useful Tips and Tricks to speed up the data analysis process in Python.
Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure
Dump content of PDB files (program databases) in JSON, XML, SQLite3, CSV etc.
Python snippets for PyMOL to be run in Jupyterlab via the jupyterlab-snippets-multimenus extension.
Universal signature generation for any system function from all Windows Builds using Winbindex
