#Singularity
Showing 14 of 14 repositories tagged #singularity, ranked by stars
A DSL for data-driven computational pipelines
Singularity has been renamed to Apptainer as part of us moving the project to the Linux Foundation. This repo has been persisted as a snapshot right before the changes.
Apptainer: Application containers for Linux
Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Schake, Bolz, et al. (2025), https://doi.org/10.1093/nar/gkaf361
HPC Container Maker
Molecular dynamics and Monte Carlo soft matter simulation on GPUs.
Container-native task automation engine.
Create container images for using Julia packages (especially useful in environments without Internet access)
Snakemake pipelines for nanopore sequencing data archiving and processing
Connectome Mapper 3 is a BIDS App that implements full anatomical, diffusion, resting/state functional MRI, and recently EEG processing pipelines, from raw T1 / DWI / BOLD , and preprocessed EEG data to multi-resolution brain parcellation with corresponding connection matrices.
AkôFlow is an open-source engine for orchestrating and executing container-based scientific workflows in the computing continuum. It was originally developed within the e-Science Research Group at the Institute of Computing, Fluminense Federal University (UFF).
Port Forwarding Utility
interactive Multi Objective K-mer Analysis
official build specifications for jupyter