#Cancer-research

ShixiangWang

sigminer

🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/index.html

ratschlab

DeepSpot

DeepSpot: Deep learning model for predicting spatial transcriptomics from H&E histopathology images. Supports spot-level (Visium) and single-cell (Xenium) resolution.

FunGeST

Palimpsest

An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.