bcgov
shinyrems
R

An R package to launch shinyrems; an online application that allows a user to access, download, clean, plot and calculate simple statistics using data from the B.C. government Environmental Monitoring System database.

Last updated Mar 31, 2026
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README

shinyrems

img Apache license

shinyrems is an app that allows you to download, clean, visualize and analyze data from the Environmental Monitoring System (EMS) database. Create plots and view water quality data with BC aquatic life water quality guidelines.

⚠️ Package Warning

As of March 2026, the B.C. government has launched a new water quality monitoring database Environmental Monitoring Data System (EnMoDs) as a replacement for EMS. **Theshinyremsapplication relies on EMS data and is current to February 26, 2026. More recent data will not be accessible.**

Installation

To install the latest development version from GitHub

r

install.packages("remotes")

remotes::install_github("bcgov/rems") remotes::install_github("bcgov/wqbc") remotes::install_github("bcgov/shinyrems")

Please remember to restart your R session after installation.

Usage

See the User Guide for a more detailed explanation of app usage.

ShinyRems app can be run with various EMS datasets that must be downloaded and stored on the user’s computer. Prior to app startup, you will be prompted to download data if required and you will be notified if data updates are available.

There are six possible run modes corresponding to different datasets:

  • ‘demo’ - uses a demo dataset that requires no download of EMS
data
  • ‘2yr’ - uses most recent 2 years of EMS data
  • ‘4yr’ - uses most recent 4 years of EMS data
  • ‘historic’ - uses historic EMS data (1965 - (Current Year - 2
Years))
  • ‘all’ - uses combined “2yr” and “historic” EMS data
  • ‘upload’ - allows user to upload their own data following correct
format

To select a run mode, provide the value (as it appears above) to shinyrems::runemsapp(). For example, type the following into your R console:

r

select historic run mode

shinyrems::runemsapp("historic")

select upload run mode

shinyrems::runemsapp("upload")

"2yr" run mode is the default and will be selected if no other value is provided

shinyrems::runemsapp()

Contribution

Please report any issues.

Pull requests are always welcome.

Please note that this project is released with a Contributor Code of Conduct. By participating in this project you agree to abide by its terms.

License

Copyright 2019 Province of British Columbia

Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at

http://www.apache.org/licenses/LICENSE-2.0

Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License.

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