#Protein-sequences

songlab-cal

tape

Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different domains of protein biology.

sacdallago

bio_embeddings

Get protein embeddings from protein sequences

lucidrains

protein-bert-pytorch

Implementation of ProteinBERT in Pytorch

sbl-sdsc

mmtf-pyspark

Methods for the parallel and distributed analysis and mining of the Protein Data Bank using MMTF and Apache Spark.

eliberis

parapred

Paratope Prediction using Deep Learning

ikmb

vcf2prot

Accelerate the generation of personalized proteomes from a Variant calling format (VCF) file and a reference proteome using graphical processing units (GPUs).