#Neuroanatomy

dipy

dipy

DIPY is the paragon 3D/4D+ medical imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.

brainglobe

cellfinder

Automated 3D cell detection in very large images

navis-org

navis

Python library for analysis of neuroanatomical data.

brainglobe

brainglobe-heatmap

Rendering anatomical heatmaps with brainrender and matplotlib